STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PZ82_GASACtRNA methyltransferase 12 homolog. (369 aa)    
Predicted Functional Partners:
G3PXS4_GASAC
tRNA methyltransferase subunit 11-2.
   
 
 0.976
G3PGQ0_GASAC
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae).
 
 
 0.806
G3PNX6_GASAC
tRNA-yW synthesizing protein 3 homolog (S. cerevisiae).
  
 
 0.791
G3NDR5_GASAC
Splicing factor 3b, subunit 3.
   
 
  0.788
G3NA25_GASAC
tRNA-yW synthesizing protein 5.
 
    
 0.769
G3NZ38_GASAC
Riboflavin kinase.
     
 0.751
G3P327_GASAC
Leucine carboxyl methyltransferase 2.
   
  
 0.680
G3P2K8_GASAC
Probable ribosome biogenesis protein; Probable pre-rRNA processing protein involved in ribosome biogenesis.
   
  
 0.607
TRMT5
tRNA (guanine(37)-N1)-methyltransferase; Specifically methylates the N1 position of guanosine-37 in various cytoplasmic and mitochondrial tRNAs. Methylation is not dependent on the nature of the nucleoside 5' of the target nucleoside. This is the first step in the biosynthesis of wybutosine (yW), a modified base adjacent to the anticodon of tRNAs and required for accurate decoding; Belongs to the TRM5 / TYW2 family.
      
0.592
G3P6C2_GASAC
BUD23 rRNA methyltransferase and ribosome maturation factor.
   
 
 0.536
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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