STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3PZF1_GASACBasonuclin 2. (1026 aa)    
Predicted Functional Partners:
G3N5U1_GASAC
G protein-coupled receptor 25; Belongs to the G-protein coupled receptor 1 family.
      
 0.485
G3N8I4_GASAC
T-cell leukemia translocation-altered gene protein homolog.
      
 0.463
G3P091_GASAC
Biogenesis of lysosome-related organelles complex 1 subunit 3; Component of the BLOC-1 complex, a complex that is required for normal biogenesis of lysosome-related organelles (LRO). Belongs to the BLOC1S3 family.
      
 0.436
G3P434_GASAC
Kit ligand a.
      
 0.412
G3PAH3_GASAC
Glutamic-oxaloacetic transaminase 1 like 1.
   
 
  0.404
G3P0A2_GASAC
Trafficking protein particle complex 6b-like.
      
 0.402
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.