STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q085_GASACF-box protein 41. (828 aa)    
Predicted Functional Partners:
G3QCJ8_GASAC
S-phase kinase-associated protein 1; Belongs to the SKP1 family.
   
 0.946
G3NPM0_GASAC
Cullin 1b; Belongs to the cullin family.
    
 0.859
G3NY10_GASAC
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.769
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.769
G3NGJ5_GASAC
CDK2 associated cullin domain 1; Belongs to the cullin family.
    
 0.756
G3PMC3_GASAC
NEDD8 ubiquitin like modifier, like.
    
 0.715
G3NBQ5_GASAC
COMM domain containing 2.
     
 0.682
G3PW35_GASAC
Geranylgeranyl transferase type-2 subunit beta; Catalyzes the transfer of a geranylgeranyl moiety from geranylgeranyl diphosphate to both cysteines of proteins with the C- terminal sequence -XXCC, -XCXC and -CCXX.
    
 
 0.681
G3PRT9_GASAC
NEDD8-activating enzyme E1 regulatory subunit; Regulatory subunit of the dimeric UBA3-NAE1 E1 enzyme. E1 activates NEDD8 by first adenylating its C-terminal glycine residue with ATP, thereafter linking this residue to the side chain of the catalytic cysteine, yielding a NEDD8-UBA3 thioester and free AMP. E1 finally transfers NEDD8 to the catalytic cysteine of UBE2M. Belongs to the ubiquitin-activating E1 family. ULA1 subfamily.
   
 
  0.674
G3NXT5_GASAC
Ring-box 1, E3 ubiquitin protein ligase.
     
 0.669
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.