STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q0A0_GASACTetratricopeptide repeat domain 9C. (214 aa)    
Predicted Functional Partners:
G3PQA7_GASAC
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.937
G3PC67_GASAC
Uncharacterized protein.
   
 0.872
G3PC70_GASAC
Uncharacterized protein.
   
 0.872
G3PC74_GASAC
Uncharacterized protein.
   
 0.872
G3Q6J5_GASAC
Tetratricopeptide repeat domain 26.
   
 0.809
G3Q0V8_GASAC
WD_REPEATS_REGION domain-containing protein.
   
 0.806
G3Q0W5_GASAC
Uncharacterized protein.
   
 0.806
G3PC58_GASAC
Uncharacterized protein; Belongs to the adenylate kinase family.
   
 0.801
G3NCP7_GASAC
Anaphase promoting complex subunit 16.
    
 0.799
G3PWM5_GASAC
Bardet-Biedl syndrome 7 protein homolog; The BBSome complex is thought to function as a coat complex required for sorting of specific membrane proteins to the primary cilia. The BBSome complex is required for ciliogenesis but is dispensable for centriolar satellite function.
    
 0.797
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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