STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q0W5_GASACUncharacterized protein. (2017 aa)    
Predicted Functional Partners:
G3PQA7_GASAC
LEO1 homolog, Paf1/RNA polymerase II complex component.
    
 0.997
G3NWJ8_GASAC
Polymerase (RNA) II (DNA directed) polypeptide F.
  
 0.992
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.992
POLR2E
RNA polymerase II subunit E.
   
 0.991
G3Q0L5_GASAC
Polymerase (RNA) II (DNA directed) polypeptide G-like.
    
 0.991
G3NC49_GASAC
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 0.990
G3P2V6_GASAC
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
    
  0.990
G3NG72_GASAC
Polymerase (RNA) II (DNA directed) polypeptide J.
    
  0.988
RANBP2
RAN binding protein 2.
   
 0.984
G3P0R7_GASAC
CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex.
    
 0.981
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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