STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q1E0_GASACCDGSH iron sulfur domain 2. (138 aa)    
Predicted Functional Partners:
G3PYM2_GASAC
Damage-specific DNA binding protein 1.
    
 
 0.875
DDA1
DET1 and DDB1 associated 1.
    
 
 0.730
G3PSH9_GASAC
DET1 and DDB1 associated 1.
    
 
 0.730
G3Q252_GASAC
Uncharacterized protein.
   
  
 0.680
G3NEB5_GASAC
RNA binding motif protein 39b.
    
 
 0.609
G3NGG6_GASAC
Uncharacterized protein.
    
 
 0.609
G3Q6G7_GASAC
LEM domain containing 3.
    
 
 0.609
G3NBA2_GASAC
NADH:ubiquinone oxidoreductase subunit S5.
   
 
 0.539
G3PLD1_GASAC
Translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae).
      
 0.523
G3PFJ2_GASAC
E3 ubiquitin-protein ligase parkin; Functions within a multiprotein E3 ubiquitin ligase complex, catalyzing the covalent attachment of ubiquitin moieties onto substrate proteins; Belongs to the RBR family. Parkin subfamily.
    
 
 0.509
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.