STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q1K0_GASACPre-mRNA processing factor 19. (505 aa)    
Predicted Functional Partners:
G3NGE9_GASAC
ISY1 splicing factor homolog.
    
 0.999
G3NMP8_GASAC
BCAS2 pre-mRNA processing factor.
   
 0.999
G3NVX4_GASAC
Peptidyl-prolyl cis-trans isomerase E; Catalyzes the cis-trans isomerization of proline imidic peptide bonds in proteins; Belongs to the cyclophilin-type PPIase family. PPIase E subfamily.
    
 0.999
G3P6H9_GASAC
XPA binding protein 2.
   
 0.999
G3P8D4_GASAC
Aquarius intron-binding spliceosomal factor.
    
 0.999
G3PDD4_GASAC
CDC5 cell division cycle 5-like (S. pombe).
   
 0.999
G3PXC1_GASAC
Pleiotropic regulator 1.
   
0.999
G3QAL6_GASAC
CWC15 spliceosome associated protein homolog.
    
 0.999
G3P3L5_GASAC
Elongation factor Tu GTP binding domain containing 2.
   
 
 0.996
G3PA33_GASAC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
 
 0.996
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.