STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q2K9_GASACProgrammed cell death 11. (1833 aa)    
Predicted Functional Partners:
G3P7P0_GASAC
Nucleolar protein 6.
   
 0.998
G3P7C6_GASAC
HEAT repeat containing 1.
   
 0.997
G3PLU0_GASAC
UTP4 small subunit processome component.
   
 0.997
G3Q5U5_GASAC
UTP20 small subunit processome component.
   
 0.997
G3PM62_GASAC
Ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
  
 0.996
G3PW45_GASAC
NOP14 nucleolar protein homolog (yeast).
   
 0.996
UTP14C
UTP14C small subunit processome component.
   
 0.995
G3NDZ3_GASAC
WD repeat domain 75.
   
 0.995
G3NET5_GASAC
WD repeat domain 46.
   
 0.995
G3PBZ3_GASAC
Ribosomal protein S9; Belongs to the universal ribosomal protein uS4 family.
  
 0.994
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.