STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q2R5_GASACSpindlin a. (231 aa)    
Predicted Functional Partners:
G3PL50_GASAC
YrdC N(6)-threonylcarbamoyltransferase domain containing.
    
   0.675
G3Q2M3_GASAC
YrdC-like domain-containing protein.
    
   0.588
G3Q2M8_GASAC
Si:ch211-153b23.4.
    
   0.588
G3N8X2_GASAC
Uncharacterized protein.
    
 
 0.560
G3Q031_GASAC
Topoisomerase I binding, arginine/serine-rich a.
    
 
 0.560
APP
Amyloid beta precursor protein.
  
     0.470
G3NQ73_GASAC
PAS domain-containing protein.
  
     0.468
G3PID5_GASAC
Amyloid beta (A4) precursor-like protein 2.
  
     0.462
G3NGM2_GASAC
Amyloid beta (A4) precursor protein b.
  
     0.449
G3NHU1_GASAC
Cyclin D-type binding-protein 1.
      
 0.426
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.