STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q3R5_GASACCarn_acyltransf domain-containing protein; Belongs to the carnitine/choline acetyltransferase family. (629 aa)    
Predicted Functional Partners:
G3NIL7_GASAC
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
   
 0.888
G3PUT5_GASAC
Sterol carrier protein 2a; Belongs to the thiolase-like superfamily. Thiolase family.
   
 0.876
G3PEP2_GASAC
Zgc:154046; Belongs to the carnitine/choline acetyltransferase family.
  
 
 
0.847
G3NEC1_GASAC
Carnitine O-acetyltransferase b.
  
  
 
0.845
G3PRY3_GASAC
Hydroxysteroid dehydrogenase like 2.
   
 0.822
G3NIB2_GASAC
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
  
0.820
G3Q6G3_GASAC
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.808
G3Q7Q6_GASAC
Malate synthase-like.
   
  
 0.773
G3NVP8_GASAC
Peroxisomal biogenesis factor 14.
    
 0.755
G3N9T2_GASAC
Peroxisomal biogenesis factor 5-like b.
    
 0.753
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.