STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q4Y2_GASACYY1 associated factor 2. (136 aa)    
Predicted Functional Partners:
RING1
Ring finger protein 1.
    
 0.922
G3PNU5_GASAC
Ring finger protein 2.
    
 0.922
G3PE09_GASAC
THAP-type domain-containing protein.
   
 0.896
G3NE85_GASAC
Polycomb group ring finger 6.
    
 0.894
G3PWQ2_GASAC
Polycomb group ring finger 1.
    
 0.891
G3PAJ3_GASAC
Polycomb group ring finger 5a.
    
 0.878
PCGF2
Polycomb group ring finger 2.
   
 0.872
G3ND53_GASAC
Bmi1 polycomb ring finger oncogene 1a.
    
 0.868
PCGF3
Polycomb group ring finger 3.
    
 0.868
G3NM10_GASAC
L3MBTL histone methyl-lysine binding protein 2.
    
 0.856
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.