STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q615_GASACPhytanoyl-CoA 2-hydroxylase. (334 aa)    
Predicted Functional Partners:
G3PK08_GASAC
Peroxisomal biogenesis factor 7.
    
 0.885
G3PU86_GASAC
Phytanoyl-CoA dioxygenase domain containing 1.
   
 
 0.877
PCYT2
Phosphate cytidylyltransferase 2, ethanolamine.
  
 
  0.856
G3Q5K2_GASAC
Phosphate cytidylyltransferase 2, ethanolamine.
  
 
  0.844
G3Q823_GASAC
Acetyl-CoA acyltransferase 1; Belongs to the thiolase-like superfamily. Thiolase family.
   
 
 0.825
G3NKL8_GASAC
Alkylglycerone-phosphate synthase; Catalyzes the exchange of an acyl for a long-chain alkyl group and the formation of the ether bond in the biosynthesis of ether phospholipids; Belongs to the FAD-binding oxidoreductase/transferase type 4 family.
  
 0.809
G3NKR2_GASAC
Serine--pyruvate aminotransferase.
    
 0.774
G3PKG4_GASAC
Serine--pyruvate aminotransferase.
    
 0.774
G3NE28_GASAC
Peroxisomal biogenesis factor 13.
     
 0.765
G3N8G6_GASAC
Peroxisomal biogenesis factor 10.
   
 
 0.760
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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