STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q7C0_GASACPoly(A)-specific ribonuclease (deadenylation nuclease). (623 aa)    
Predicted Functional Partners:
G3Q3U0_GASAC
Decapping mRNA 2.
     
 0.796
dis3l2
DIS3-like exonuclease 2; 3'-5'-exoribonuclease that specifically recognizes RNAs polyuridylated at their 3' end and mediates their degradation. Component of an exosome-independent RNA degradation pathway that mediates degradation of both mRNAs and miRNAs that have been polyuridylated by a terminal uridylyltransferase. Essential for correct mitosis, and negatively regulates cell proliferation. Belongs to the RNR ribonuclease family. DIS3L2 subfamily.
   
 
 0.775
G3PVC5_GASAC
Exosome component 3.
   
 
 0.772
G3PHU6_GASAC
Exosome component 5.
     
 0.764
G3NDW6_GASAC
Exosome component 6.
   
 
 0.760
G3PW84_GASAC
Far upstream element (FUSE) binding protein 1.
   
 0.759
G3Q126_GASAC
Exosome component 4.
   
 
 0.750
KHSRP
KH-type splicing regulatory protein.
    
 0.746
G3Q5E9_GASAC
Uncharacterized protein.
    
 0.746
G3NFF9_GASAC
Exosome component 7.
   
 
 0.734
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.