STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q833_GASACMicrotubule-associated protein 1 light chain 3 gamma. (128 aa)    
Predicted Functional Partners:
G3N5R5_GASAC
NBR1 autophagy cargo receptor b.
   
 0.998
G3NHQ0_GASAC
NBR1 autophagy cargo receptor a.
   
 0.998
G3NIM8_GASAC
SKICH domain-containing protein.
    
 0.961
G3PRD2_GASAC
Autophagy-related protein 3.
   
 0.950
G3NWL2_GASAC
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...]
   
 0.948
G3PV31_GASAC
Sequestosome 1.
   
 0.926
G3NL32_GASAC
Cysteine protease; Cysteine protease required for the cytoplasm to vacuole transport (Cvt) and autophagy; Belongs to the peptidase C54 family.
   
 0.919
G3NNH8_GASAC
Mindbomb E3 ubiquitin protein ligase 2.
   
 0.900
ATG14
Autophagy related 14.
    
 0.892
G3NH32_GASAC
Pleckstrin homology domain containing, family M (with RUN domain) member 1.
    
 
 0.889
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.