STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q886_GASACPseudouridine synthase 10. (522 aa)    
Predicted Functional Partners:
G3NR91_GASAC
Actin binding transcription modulator.
    
   0.876
G3Q520_GASAC
NOP10 ribonucleoprotein homolog (yeast).
  
  
 0.652
G3NI79_GASAC
Pseudouridine synthase 7.
   
  
 0.641
G3PML5_GASAC
RNA pseudouridine synthase domain containing 1.
      
 0.590
G3NKC3_GASAC
Dyskeratosis congenita 1, dyskerin.
   
  
 0.583
G3Q4X3_GASAC
Pseudouridine synthase 7 like.
   
  
 0.578
G3NBR7_GASAC
Pseudouridylate synthase 3.
   
  
 0.554
G3Q032_GASAC
Pseudouridine synthase 1.
   
  
 0.545
G3N9C1_GASAC
TruB pseudouridine (psi) synthase family member 2.
   
  
 0.533
G3PGQ0_GASAC
tRNA-yW synthesizing protein 1 homolog (S. cerevisiae).
      
 0.529
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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