STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q8H7_GASACSi:ch211-244b2.4. (352 aa)    
Predicted Functional Partners:
G3NX84_GASAC
Thyroid hormone receptor interactor 12.
     
 0.786
G3PCG6_GASAC
Ribosomal protein S27a.
    
  0.695
G3P0K7_GASAC
Cleavage and polyadenylation specificity factor subunit 2.
   
 
  0.618
G3NW58_GASAC
Tyrosine-protein kinase.
   
 
  0.583
G3NI50_GASAC
Ubiquitin-like modifier activating enzyme 5.
    
  0.578
G3NWL2_GASAC
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 as well as the ATG8 family proteins for their conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Required for autophagic death induced by caspase-8 inhibition. Required for mitophagy which contributes to regulate mitochondrial quantity and quality by eliminating the mitochondria [...]
    
  0.578
UBA3
Ubiquitin like modifier activating enzyme 3.
    
  0.569
G3P2M0_GASAC
Uncharacterized protein.
   
  0.569
G3P4I1_GASAC
Ubiquitin-like modifier activating enzyme 3.
    
  0.569
G3NY48_GASAC
Zinc finger, AN1-type domain 4.
   
  0.566
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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