G3Q9J5_GASAC protein (Gasterosteus aculeatus)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

G3Q9J5_GASAC

Phosphatidylinositol binding clathrin assembly protein a. (590 aa)

Predicted Functional Partners:

G3PBC3_GASAC

0.990

G3PUV9_GASAC

0.990

G3PKG3_GASAC

0.945

G3PBG4_GASAC

0.851

G3NZ68_GASAC

0.841

G3PCG6_GASAC

0.840

G3QA52_GASAC

0.823

G3NF84_GASAC

0.788

G3PAM5_GASAC

0.788

G3PXH9_GASAC

0.788

Your Current Organism:

Gasterosteus aculeatus

NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
G3NF84_GASAC	G3NZ68_GASAC	ENSGACP00000003985	ENSGACP00000010640	Epidermal growth factor receptor pathway substrate 15-like 1a.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.854
G3NF84_GASAC	G3PAM5_GASAC	ENSGACP00000003985	ENSGACP00000014649	Epidermal growth factor receptor pathway substrate 15-like 1a.	Epidermal growth factor receptor pathway substrate 15.	0.838
G3NF84_GASAC	G3PBC3_GASAC	ENSGACP00000003985	ENSGACP00000014897	Epidermal growth factor receptor pathway substrate 15-like 1a.	Intersectin 2a.	0.998
G3NF84_GASAC	G3PBG4_GASAC	ENSGACP00000003985	ENSGACP00000014938	Epidermal growth factor receptor pathway substrate 15-like 1a.	Intersectin 1 (SH3 domain protein).	0.962
G3NF84_GASAC	G3PCG6_GASAC	ENSGACP00000003985	ENSGACP00000015290	Epidermal growth factor receptor pathway substrate 15-like 1a.	Ribosomal protein S27a.	0.894
G3NF84_GASAC	G3PKG3_GASAC	ENSGACP00000003985	ENSGACP00000018093	Epidermal growth factor receptor pathway substrate 15-like 1a.	Cyclin G associated kinase.	0.929
G3NF84_GASAC	G3PUV9_GASAC	ENSGACP00000003985	ENSGACP00000021396	Epidermal growth factor receptor pathway substrate 15-like 1a.	Intersectin 2b.	0.998
G3NF84_GASAC	G3Q9J5_GASAC	ENSGACP00000003985	ENSGACP00000026560	Epidermal growth factor receptor pathway substrate 15-like 1a.	Phosphatidylinositol binding clathrin assembly protein a.	0.788
G3NF84_GASAC	G3QA52_GASAC	ENSGACP00000003985	ENSGACP00000026768	Epidermal growth factor receptor pathway substrate 15-like 1a.	Ubiquitin B.	0.943
G3NZ68_GASAC	G3NF84_GASAC	ENSGACP00000010640	ENSGACP00000003985	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Epidermal growth factor receptor pathway substrate 15-like 1a.	0.854
G3NZ68_GASAC	G3PAM5_GASAC	ENSGACP00000010640	ENSGACP00000014649	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Epidermal growth factor receptor pathway substrate 15.	0.854
G3NZ68_GASAC	G3PCG6_GASAC	ENSGACP00000010640	ENSGACP00000015290	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ribosomal protein S27a.	0.999
G3NZ68_GASAC	G3PKG3_GASAC	ENSGACP00000010640	ENSGACP00000018093	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Cyclin G associated kinase.	0.674
G3NZ68_GASAC	G3PXH9_GASAC	ENSGACP00000010640	ENSGACP00000022318	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Uncharacterized protein.	0.854
G3NZ68_GASAC	G3Q9J5_GASAC	ENSGACP00000010640	ENSGACP00000026560	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Phosphatidylinositol binding clathrin assembly protein a.	0.841
G3NZ68_GASAC	G3QA52_GASAC	ENSGACP00000010640	ENSGACP00000026768	Ubiquitin A-52 residue ribosomal protein fusion product 1.	Ubiquitin B.	0.999
G3PAM5_GASAC	G3NF84_GASAC	ENSGACP00000014649	ENSGACP00000003985	Epidermal growth factor receptor pathway substrate 15.	Epidermal growth factor receptor pathway substrate 15-like 1a.	0.838
G3PAM5_GASAC	G3NZ68_GASAC	ENSGACP00000014649	ENSGACP00000010640	Epidermal growth factor receptor pathway substrate 15.	Ubiquitin A-52 residue ribosomal protein fusion product 1.	0.854
G3PAM5_GASAC	G3PBC3_GASAC	ENSGACP00000014649	ENSGACP00000014897	Epidermal growth factor receptor pathway substrate 15.	Intersectin 2a.	0.998
G3PAM5_GASAC	G3PBG4_GASAC	ENSGACP00000014649	ENSGACP00000014938	Epidermal growth factor receptor pathway substrate 15.	Intersectin 1 (SH3 domain protein).	0.962