STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3Q9U2_GASACUncharacterized protein. (336 aa)    
Predicted Functional Partners:
G3PMC7_GASAC
Vacuolar protein sorting-associated protein 35; Plays a role in vesicular protein sorting.
   
 0.988
G3NLK9_GASAC
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
   
 0.977
G3PUC0_GASAC
VPS26, retromer complex component A.
  
 
0.957
G3P2G3_GASAC
Sorting nexin 3.
   
 0.947
G3QAV7_GASAC
Sorting nexin 12.
   
 0.947
G3NVK8_GASAC
Sorting nexin 10a.
   
 0.863
SNX11
Sorting nexin 11.
    
 0.862
G3NV82_GASAC
TBC1 domain family, member 5.
   
 
 0.862
G3P089_GASAC
Sorting nexin 10b.
    
 0.862
G3NAU0_GASAC
Sorting nexin 2.
   
 
 0.782
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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