STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QA15_GASACCwf21 domain-containing protein. (268 aa)    
Predicted Functional Partners:
G3PCH6_GASAC
Cell division cycle 40 homolog (S. cerevisiae).
   
 0.967
G3NBJ7_GASAC
CWC22 spliceosome associated protein homolog.
    
 0.963
G3NWI0_GASAC
SYF2 pre-mRNA-splicing factor.
    
 0.957
G3PT86_GASAC
DEAH (Asp-Glu-Ala-His) box polypeptide 38.
    
 0.957
G3Q287_GASAC
CWC25 spliceosome associated protein homolog.
   
 0.957
G3P5Q5_GASAC
YJU2 splicing factor homolog.
   
 0.951
G3Q274_GASAC
SLU7 homolog, splicing factor.
    
 0.949
G3NWB2_GASAC
Serine/arginine repetitive matrix 1.
   
 0.945
G3Q9D2_GASAC
Small nuclear ribonucleoprotein polypeptide F.
    
 0.942
G3PA33_GASAC
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 0.941
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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