STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QA95_GASACAMMECR1 domain-containing protein. (320 aa)    
Predicted Functional Partners:
G3NKN6_GASAC
Mediator of cell motility 1.
  
    0.803
APOA1BP
NAD(P)H-hydrate epimerase; Catalyzes the epimerization of the S- and R-forms of NAD(P)HX, a damaged form of NAD(P)H that is a result of enzymatic or heat-dependent hydration. This is a prerequisite for the S-specific NAD(P)H-hydrate dehydratase to allow the repair of both epimers of NAD(P)HX.
  
  
 0.526
G3PI19_GASAC
YjeF N-terminal domain containing 3.
  
  
 0.526
G3NWT6_GASAC
Protein geranylgeranyltransferase type I, beta subunit.
    
   0.510
G3PW62_GASAC
Nei-like DNA glycosylase 3.
      
 0.499
G3PQ86_GASAC
TSEN54 tRNA splicing endonuclease subunit.
    
   0.465
G3P8V0_GASAC
Zinc finger CCCH-type containing 14.
    
 
 0.444
G3NTV6_GASAC
A kinase (PRKA) anchor protein 17A.
      
 0.431
G3PYF5_GASAC
PDZ domain containing 11.
    
 
 0.426
G3PMG0_GASAC
Phosphatidylethanolamine binding protein 1.
  
    0.410
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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