STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QAF6_GASACZinc finger CCCH-type containing 12B. (774 aa)    
Predicted Functional Partners:
G3PIJ0_GASAC
Inhibitor of nuclear factor kappa B kinase regulatory subunit gamma.
    
  0.635
G3Q620_GASAC
Optineurin.
    
  0.635
G3PMC3_GASAC
NEDD8 ubiquitin like modifier, like.
    
   0.549
casp10
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.535
casp8
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.535
G3PHA8_GASAC
Uncharacterized protein; Belongs to the peptidase C14A family.
     
 0.535
G3PCP4_GASAC
SAP domain containing ribonucleoprotein.
   
  
 0.479
G3PVE8_GASAC
THO complex 3.
      
 0.461
G3PFI0_GASAC
Zinc finger CCCH-type containing 4.
      
 0.435
G3NK14_GASAC
Fork-head domain-containing protein.
    
  0.431
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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