STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QAW4_GASACRNA binding motif protein 14a. (476 aa)    
Predicted Functional Partners:
G3P227_GASAC
NOP56 ribonucleoprotein homolog.
   
 
 0.968
G3NJV1_GASAC
Fibrillarin.
   
 
 0.967
G3PKR4_GASAC
NOP58 ribonucleoprotein homolog (yeast).
   
 
 0.899
G3N506_GASAC
Activator of basal transcription 1.
   
   0.845
G3NTL5_GASAC
Ribosome production factor 2 homolog.
   
   0.823
G3NWQ5_GASAC
NOC2-like nucleolar associated transcriptional repressor.
   
 
 0.823
G3PZV9_GASAC
Nucleolar GTP-binding protein 1; Involved in the biogenesis of the 60S ribosomal subunit. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. OBG GTPase family. NOG subfamily.
   
 
 0.818
G3NA42_GASAC
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
 
 0.813
G3N523_GASAC
Guanine nucleotide binding protein-like 3 (nucleolar).
   
 
 0.802
G3P7T0_GASAC
Guanine nucleotide binding protein-like 3 (nucleolar)-like.
   
 
 0.802
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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