STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QBJ6_GASACMultidrug and toxin extrusion protein; Belongs to the multi antimicrobial extrusion (MATE) (TC 2.A.66.1) family. (566 aa)    
Predicted Functional Partners:
G3P8L5_GASAC
Hydroxysteroid (17-beta) dehydrogenase 10; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.842
G3P7J4_GASAC
Farnesyl-diphosphate farnesyltransferase 1.
  
 
 0.771
G3N778_GASAC
tRNA methyltransferase 10A.
   
 0.727
G3PRB5_GASAC
tRNA methyltransferase 10C, mitochondrial RNase P subunit.
   
 0.727
G3Q5S0_GASAC
tRNA methyltransferase 10B.
   
 0.727
G3NGX8_GASAC
POP1 homolog, ribonuclease P/MRP subunit.
   
 
 0.698
G3PGR8_GASAC
Ribonuclease P/MRP protein subunit POP5; Component of ribonuclease P, a protein complex that generates mature tRNA molecules by cleaving their 5'-ends.
     
 0.677
G3P7R1_GASAC
Ribonuclease P/MRP 30 subunit.
   
 
 0.647
G3PNG8_GASAC
Ribonuclease P protein subunit p29; Component of ribonuclease P, a ribonucleoprotein complex that generates mature tRNA molecules by cleaving their 5'-ends.
     
 0.630
G3Q0Q2_GASAC
NADH:ubiquinone oxidoreductase complex assembly factor 6.
  
 
 0.625
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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