STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QBM4_GASACBUD13 homolog. (505 aa)    
Predicted Functional Partners:
G3NAR2_GASAC
RNA binding motif protein X-linked 2.
   
 0.998
G3PDD4_GASAC
CDC5 cell division cycle 5-like (S. pombe).
    
 
 0.995
G3PKJ6_GASAC
Smad nuclear interacting protein.
   
 0.995
G3Q1K0_GASAC
Pre-mRNA processing factor 19.
    
 
 0.994
G3PC73_GASAC
Small nuclear ribonucleoprotein 200 (U5).
   
 
 0.993
G3PZI1_GASAC
Microfibril associated protein 1.
   
   0.987
G3NAG5_GASAC
DEAH (Asp-Glu-Ala-His) box polypeptide 16.
   
 0.979
G3NBJ7_GASAC
CWC22 spliceosome associated protein homolog.
   
 
 0.977
G3Q5I4_GASAC
Splicing factor 3b, subunit 2.
    
 
 0.975
G3PR91_GASAC
Splicing factor 3a, subunit 2.
    
 
 0.974
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.