STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QC43_GASACUbiquitin specific peptidase 28; Belongs to the peptidase C19 family. (1090 aa)    
Predicted Functional Partners:
G3QA52_GASAC
Ubiquitin B.
   
 0.939
G3PCG6_GASAC
Ribosomal protein S27a.
   
 0.927
G3NZ68_GASAC
Ubiquitin A-52 residue ribosomal protein fusion product 1.
    
 0.920
G3NX84_GASAC
Thyroid hormone receptor interactor 12.
   
 
 0.888
G3NKK9_GASAC
Transcriptional regulator; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes.
    
 0.855
G3NY48_GASAC
Zinc finger, AN1-type domain 4.
   
 0.815
G3P2M0_GASAC
Uncharacterized protein.
   
 0.814
UBL4A
Ubiquitin like 4A.
   
 0.814
G3PH76_GASAC
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.814
G3P6K9_GASAC
Ubiquitinyl hydrolase 1.
   
 
 0.788
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.