STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
G3QCG2_GASACFAD-dependent oxidoreductase domain containing 1. (505 aa)    
Predicted Functional Partners:
G3NBA2_GASAC
NADH:ubiquinone oxidoreductase subunit S5.
    
 
 0.705
G3NHV1_GASAC
Tyrosine--tRNA ligase.
   
  
 0.636
G3P506_GASAC
Valyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
   
  
 0.632
G3NC31_GASAC
Ubiquinone biosynthesis protein; Lipid-binding protein involved in the biosynthesis of coenzyme Q, also named ubiquinone, an essential lipid-soluble electron transporter for aerobic cellular respiration.
   
  
 0.609
G3N5Z1_GASAC
Sulfite oxidase.
      
 0.592
G3NQI3_GASAC
Si:ch1073-228b5.2.
   
  
 0.580
G3PLF0_GASAC
Peptidase (mitochondrial processing) alpha; Belongs to the peptidase M16 family.
   
 
 0.575
G3N6W3_GASAC
ECSIT signalling integrator.
   
  
 0.572
G3PEV5_GASAC
NADH:ubiquinone oxidoreductase complex assembly factor 1.
   
  
 0.571
G3PAS4_GASAC
Acyl-CoA dehydrogenase family, member 9.
   
 
 0.564
Your Current Organism:
Gasterosteus aculeatus
NCBI taxonomy Id: 69293
Other names: G. aculeatus, three spined stickleback, three-spined stickleback
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