| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KOO03509.1 | KOO03970.1 | AKJ17_09170 | AKJ17_07820 | 50S ribosomal protein L7ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | 0.835 |
| KOO03509.1 | lexA | AKJ17_09170 | AKJ17_16060 | 50S ribosomal protein L7ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.667 |
| KOO03509.1 | recA | AKJ17_09170 | AKJ17_13830 | 50S ribosomal protein L7ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.572 |
| KOO03970.1 | KOO03509.1 | AKJ17_07820 | AKJ17_09170 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | 50S ribosomal protein L7ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.835 |
| KOO03970.1 | lexA | AKJ17_07820 | AKJ17_16060 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 0.797 |
| KOO03970.1 | mfd | AKJ17_07820 | AKJ17_10040 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | 0.713 |
| KOO03970.1 | ppnK | AKJ17_07820 | AKJ17_07815 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | Inorganic polyphosphate kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP. | 0.605 |
| KOO03970.1 | radA | AKJ17_07820 | AKJ17_15510 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.656 |
| KOO03970.1 | recA | AKJ17_07820 | AKJ17_13830 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.833 |
| KOO03970.1 | recX | AKJ17_07820 | AKJ17_13835 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | Recombinase RecX; Modulates RecA activity; Belongs to the RecX family. | 0.658 |
| KOO03970.1 | uvrA | AKJ17_07820 | AKJ17_13555 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate. | 0.626 |
| KOO03970.1 | uvrC | AKJ17_07820 | AKJ17_01225 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.695 |
| KOO03970.1 | xseA | AKJ17_07820 | AKJ17_07920 | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | Exodeoxyribonuclease VII large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. | 0.674 |
| lexA | KOO03509.1 | AKJ17_16060 | AKJ17_09170 | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | 50S ribosomal protein L7ae; Derived by automated computational analysis using gene prediction method: Protein Homology. | 0.667 |
| lexA | KOO03970.1 | AKJ17_16060 | AKJ17_07820 | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | 0.797 |
| lexA | recA | AKJ17_16060 | AKJ17_13830 | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | Recombinase A; Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.991 |
| lexA | recX | AKJ17_16060 | AKJ17_13835 | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | Recombinase RecX; Modulates RecA activity; Belongs to the RecX family. | 0.486 |
| lexA | uvrC | AKJ17_16060 | AKJ17_01225 | LexA family transcriptional regulator; Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair. | Excinuclease ABC subunit C; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrC both incises the 5' and 3' sides of the lesion. The N-terminal half is responsible for the 3' incision and the C-terminal half is responsible for the 5' incision. | 0.430 |
| mfd | KOO03970.1 | AKJ17_10040 | AKJ17_07820 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | Recombination and repair protein; May be involved in recombinational repair of damaged DNA. | 0.713 |
| mfd | radA | AKJ17_10040 | AKJ17_15510 | Transcription-repair coupling factor; Couples transcription and DNA repair by recognizing RNA polymerase (RNAP) stalled at DNA lesions. Mediates ATP-dependent release of RNAP and its truncated transcript from the DNA, and recruitment of nucleotide excision repair machinery to the damaged site; In the C-terminal section; belongs to the helicase family. RecG subfamily. | DNA repair protein RadA; DNA-dependent ATPase involved in processing of recombination intermediates, plays a role in repairing DNA breaks. Stimulates the branch migration of RecA-mediated strand transfer reactions, allowing the 3' invading strand to extend heteroduplex DNA faster. Binds ssDNA in the presence of ADP but not other nucleotides, has ATPase activity that is stimulated by ssDNA and various branched DNA structures, but inhibited by SSB. Does not have RecA's homology-searching function. | 0.483 |