STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL01723.1Iron complex transport system ATP-binding protein. (260 aa)    
Predicted Functional Partners:
SHL01765.1
Iron complex transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 0.999
SHL01804.1
Iron complex transport system substrate-binding protein.
 
 0.994
SHL01842.1
Iron complex transport system substrate-binding protein.
  
 0.961
SHM62780.1
ABC-type Fe3+-hydroxamate transport system, substrate-binding protein.
 
 0.955
SHL42222.1
GxxExxY protein.
  
 0.842
SHL56800.1
GxxExxY protein.
  
 0.842
SHL61848.1
GxxExxY protein.
  
 0.842
SHM24893.1
GxxExxY protein.
  
 0.842
SHM67061.1
GxxExxY protein.
  
 0.842
SHM68010.1
GxxExxY protein.
  
 0.842
Your Current Organism:
Flavobacterium xanthum
NCBI taxonomy Id: 69322
Other names: ACAM 81, Cytophaga xantha, DSM 3661, F. xanthum, IFO 14972, JCM 20358, LMG 8372, LMG:8372, NBRC 14972, NCIMB 2069
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