STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHL54059.1Glycosyl transferase family 2. (336 aa)    
Predicted Functional Partners:
SHL54095.1
Glycosyltransferase involved in cell wall bisynthesis.
       0.781
SHL54123.1
Glycosyl transferase 4-like.
 
 
  0.780
SHL54158.1
Glycosyl transferase family 11.
    
  0.604
SHM28886.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.603
SHL54022.1
Hypothetical protein.
       0.565
SHM28927.1
Glycosyltransferase involved in cell wall bisynthesis.
  
 
  0.532
SHL54410.1
Lipopolysaccharide transport system ATP-binding protein.
 
    0.518
SHL54446.1
Lipopolysaccharide transport system permease protein.
 
    0.515
SHL54194.1
Glycosyl transferase family 2.
 
     0.486
SHL54309.1
dTDP-glucose 4,6-dehydratase/UDP-glucose 4-epimerase.
  
 
  0.484
Your Current Organism:
Flavobacterium xanthum
NCBI taxonomy Id: 69322
Other names: ACAM 81, Cytophaga xantha, DSM 3661, F. xanthum, IFO 14972, JCM 20358, LMG 8372, LMG:8372, NBRC 14972, NCIMB 2069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.