Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SHL43419.1 | SHM17158.1 | SAMN05443669_100778 | SAMN05443669_102432 | Conserved hypothetical protein. | Putative membrane protein. | 0.528 |
SHM17118.1 | SHM17158.1 | SAMN05443669_102431 | SAMN05443669_102432 | Hypothetical protein. | Putative membrane protein. | 0.983 |
SHM17118.1 | menA | SAMN05443669_102431 | SAMN05443669_102433 | Hypothetical protein. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.552 |
SHM17118.1 | menB | SAMN05443669_102431 | SAMN05443669_102430 | Hypothetical protein. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.507 |
SHM17158.1 | SHL43419.1 | SAMN05443669_102432 | SAMN05443669_100778 | Putative membrane protein. | Conserved hypothetical protein. | 0.528 |
SHM17158.1 | SHM17118.1 | SAMN05443669_102432 | SAMN05443669_102431 | Putative membrane protein. | Hypothetical protein. | 0.983 |
SHM17158.1 | SHM18227.1 | SAMN05443669_102432 | SAMN05443669_102456 | Putative membrane protein. | Conserved hypothetical protein. | 0.528 |
SHM17158.1 | SHM59776.1 | SAMN05443669_102432 | SAMN05443669_10481 | Putative membrane protein. | RHS repeat-associated core domain-containing protein. | 0.444 |
SHM17158.1 | menA | SAMN05443669_102432 | SAMN05443669_102433 | Putative membrane protein. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.561 |
SHM17158.1 | menB | SAMN05443669_102432 | SAMN05443669_102430 | Putative membrane protein. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.538 |
SHM18227.1 | SHM17158.1 | SAMN05443669_102456 | SAMN05443669_102432 | Conserved hypothetical protein. | Putative membrane protein. | 0.528 |
SHM59776.1 | SHM17158.1 | SAMN05443669_10481 | SAMN05443669_102432 | RHS repeat-associated core domain-containing protein. | Putative membrane protein. | 0.444 |
menA | SHM17118.1 | SAMN05443669_102433 | SAMN05443669_102431 | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | Hypothetical protein. | 0.552 |
menA | SHM17158.1 | SAMN05443669_102433 | SAMN05443669_102432 | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | Putative membrane protein. | 0.561 |
menA | menB | SAMN05443669_102433 | SAMN05443669_102430 | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 0.898 |
menB | SHM17118.1 | SAMN05443669_102430 | SAMN05443669_102431 | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | Hypothetical protein. | 0.507 |
menB | SHM17158.1 | SAMN05443669_102430 | SAMN05443669_102432 | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | Putative membrane protein. | 0.538 |
menB | menA | SAMN05443669_102430 | SAMN05443669_102433 | 1,4-Dihydroxy-2-naphthoyl-CoA synthase; Converts o-succinylbenzoyl-CoA (OSB-CoA) to 1,4-dihydroxy-2- naphthoyl-CoA (DHNA-CoA); Belongs to the enoyl-CoA hydratase/isomerase family. MenB subfamily. | 1,4-dihydroxy-2-naphthoate prenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily. | 0.898 |