STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM31012.1Transposase. (326 aa)    
Predicted Functional Partners:
SHM31060.1
IS66 Orf2 like protein.
 
     0.903
SHL52209.1
IS66 C-terminal element.
 
     0.795
SHL58670.1
IS66 C-terminal element.
 
     0.795
SHM38700.1
IS66 C-terminal element.
 
     0.795
SHM53153.1
IS66 C-terminal element.
 
     0.795
SHM54987.1
IS66 C-terminal element.
 
     0.795
SHM73660.1
IS66 C-terminal element.
 
     0.795
SHM74690.1
IS66 C-terminal element.
 
     0.795
SHM76684.1
IS66 C-terminal element.
 
     0.795
SHM78328.1
IS66 C-terminal element.
 
     0.795
Your Current Organism:
Flavobacterium xanthum
NCBI taxonomy Id: 69322
Other names: ACAM 81, Cytophaga xantha, DSM 3661, F. xanthum, IFO 14972, JCM 20358, LMG 8372, LMG:8372, NBRC 14972, NCIMB 2069
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.