STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHM37251.1Response regulator receiver domain-containing protein. (140 aa)    
Predicted Functional Partners:
SHL71916.1
PAS domain S-box-containing protein.
  
 0.999
SHM37398.1
PAS domain S-box-containing protein.
 
 0.999
SHM37212.1
Hpt domain-containing protein.
 
 0.998
SHL13020.1
PAS domain S-box-containing protein.
 
 0.992
SHM71485.1
PAS domain S-box-containing protein.
 
 0.992
SHM34138.1
PAS domain S-box-containing protein.
 
 0.957
SHM71531.1
Signal transduction histidine kinase.
 
 0.953
SHM13695.1
PAS domain S-box-containing protein.
 
 0.942
SHM50940.1
Signal transduction histidine kinase.
  
 0.934
SHM71445.1
Two-component system, chemotaxis family, CheB/CheR fusion protein; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
 
 
 0.934
Your Current Organism:
Flavobacterium xanthum
NCBI taxonomy Id: 69322
Other names: ACAM 81, Cytophaga xantha, DSM 3661, F. xanthum, IFO 14972, JCM 20358, LMG 8372, LMG:8372, NBRC 14972, NCIMB 2069
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