STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ32933.1COG3175 Cytochrome oxidase assembly factor. (188 aa)    
Predicted Functional Partners:
AGZ32938.1
Cytochrome oxidase assembly; COG1612 Uncharacterized protein required for cytochrome oxidase assembly.
 
 0.992
AGZ32939.1
Protoheme IX farnesyltransferase; COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor).
 
 0.989
AGZ32931.1
COG1622 Heme/copper-type cytochrome/quinol oxidases, subunit 2.
 
  
 0.983
AGZ36967.1
Protoheme IX farnesyltransferase; COG0109 Polyprenyltransferase (cytochrome oxidase assembly factor).
  
 0.976
AGZ32934.1
COG1845 Heme/copper-type cytochrome/quinol oxidase, subunit 3.
 
  
 0.971
AGZ32936.1
Hypothetical protein.
 
 
 0.957
AGZ32932.1
COG0843 Heme/copper-type cytochrome/quinol oxidases, subunit 1.
 
  
 0.949
AGZ32937.1
Hypothetical protein.
 
 
 0.804
AGZ35259.1
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
  
 
 0.719
AGZ32940.1
COG1999 Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems.
 
 
 0.647
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.