STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGZ32997.1Type I toxin efflux ATP-binding protein; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain. (718 aa)    
Predicted Functional Partners:
AGZ32998.1
COG0845 Membrane-fusion protein.
 
 
 0.981
AGZ36335.1
COG0845 Membrane-fusion protein.
 
 
 0.923
AGZ36977.1
COG0845 Membrane-fusion protein.
 
 
 0.923
AGZ36976.1
COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
  
  
 
0.917
AGZ36334.1
Type I secretion system ATPase; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
  
  
 
0.902
AGZ36333.1
Type I secretion outer membrane protein, TolC; COG1538 Outer membrane protein.
 
  
 0.846
AGZ32993.1
COG3672 Predicted periplasmic protein.
 
  
 0.822
AGZ36338.1
COG0845 Membrane-fusion protein.
  
 0.803
AGZ36332.1
Outer membrane adhesin-like protein; COG2931 RTX toxins and related Ca2+-binding proteins.
 
  
 0.795
AGZ32995.1
Hypothetical protein.
 
     0.757
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.