STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33050.1Hypothetical protein; COG1119 ABC-type molybdenum transport system, ATPase component/photorepair protein PhrA. (160 aa)    
Predicted Functional Partners:
AGZ33051.1
COG0488 ATPase components of ABC transporters with duplicated ATPase domains.
       0.619
AGZ33052.1
Hypothetical protein; COG0668 Small-conductance mechanosensitive channel.
       0.619
AGZ36910.1
GTP-binding protein Der; COG1160 Predicted GTPases.
   
    0.519
AGZ37213.1
Hypothetical protein.
  
     0.504
AGZ33089.1
HSR1-like GTP-binding protein; COG0486 Predicted GTPase.
   
    0.465
AGZ33053.1
Lysine exporter protein LysE/YggA; COG1280 Putative threonine efflux protein.
       0.461
AGZ33777.1
Hypothetical protein; COG0392 Predicted integral membrane protein.
  
     0.455
AGZ33778.1
Hypothetical protein; COG3233 Predicted deacetylase.
  
     0.444
AGZ35160.1
Auxin efflux carrier; COG0679 Predicted permeases.
  
     0.415
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.