STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33212.1Histidine ABC transporter ATP-binding protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component. (276 aa)    
Predicted Functional Partners:
AGZ33210.1
Putative histidine transporter substrate-binding protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
 0.999
AGZ33211.1
Binding-protein dependent transport system inner membrane protein; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 0.999
AGZ34082.1
COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
 0.997
AGZ37531.1
COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
 0.997
AGZ37539.1
Choline ABC transporter permease; COG4176 ABC-type proline/glycine betaine transport system, permease component.
 0.997
AGZ32906.1
Choline ABC transporter periplasmic binding protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
 0.995
AGZ37538.1
Glycine betaine/L-proline ABC transporter periplasmic binding protein; COG2113 ABC-type proline/glycine betaine transport systems, periplasmic components.
 
 0.995
AGZ37540.1
Choline ABC transporter ATP-binding protein; COG4175 ABC-type proline/glycine betaine transport system, ATPase component.
  
  
 
0.905
AGZ36896.1
COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
 
 
 0.845
AGZ36897.1
Binding-protein-dependent transport system inner membrane protein; COG1174 ABC-type proline/glycine betaine transport systems, permease component.
 
 0.827
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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