STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33298.1Peptidase U62 modulator of DNA gyrase; COG0312 Predicted Zn-dependent proteases and their inactivated homologs. (480 aa)    
Predicted Functional Partners:
AGZ33297.1
Hypothetical protein; COG0312 Predicted Zn-dependent proteases and their inactivated homologs.
 
    0.955
AGZ36860.1
pmbA protein; COG0312 Predicted Zn-dependent proteases and their inactivated homologs.
 
 
 0.821
AGZ33299.1
COG1960 Acyl-CoA dehydrogenases.
       0.675
AGZ33296.1
EmrB/QacA family drug resistance transporter; COG0477 Permeases of the major facilitator superfamily.
       0.550
AGZ33295.1
COG0513 Superfamily II DNA and RNA helicases.
       0.459
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.