Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AGZ33302.1COG1960 Acyl-CoA dehydrogenases. (600 aa)    
Predicted Functional Partners:
fadB
Multifunctional fatty acid oxidation complex subunit alpha; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.816
AGZ35906.1
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 0.787
AGZ37033.1
COG0318 Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II.
 
 
 0.709
AGZ34176.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.696
AGZ36055.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 
 0.694
AGZ35978.1
COG3173 Predicted aminoglycoside phosphotransferase.
 
 
 0.654
AGZ37524.1
COG2025 Electron transfer flavoprotein, alpha subunit.
 
 
 0.635
AGZ36056.1
COG2086 Electron transfer flavoprotein, beta subunit.
 
 
 0.634
AGZ35551.1
long-chain-fatty-acid-CoA ligase; COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
  
 0.625
AGZ34806.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.622
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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