STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33371.1Iron ABC transporter periplasmic iron-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component. (337 aa)    
Predicted Functional Partners:
AGZ33370.1
Binding-protein-dependent transport system inner membrane protein; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.994
AGZ37712.1
Binding-protein-dependent transport system inner membrane protein; COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.977
AGZ33087.1
ABC transporter substrate-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
 0.929
AGZ33884.1
ABC transporter-like protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
 
 0.928
AGZ37713.1
Extracellular solute-binding protein; COG1840 ABC-type Fe3+ transport system, periplasmic component.
  
  
 
0.925
AGZ33086.1
COG1178 ABC-type Fe3+ transport system, permease component.
 
 
 0.913
AGZ33085.1
2-aminoethylphosphonate ABC transporter ATP-binding protein; COG3842 ABC-type spermidine/putrescine transport systems, ATPase components.
 
 
 0.863
AGZ33748.1
Hypothetical protein; COG3487 Uncharacterized iron-regulated protein.
   
    0.616
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.