STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cobHprecorrin-8X methylmutase; COG2082 Precorrin isomerase. (208 aa)    
Predicted Functional Partners:
AGZ33417.1
Precorrin-6y C5,15-methyltransferase subunit CbiE; COG2241 Precorrin-6B methylase 1.
 
 
 0.999
AGZ33421.1
precorrin-3B C(17)-methyltransferase; COG2073 Cobalamin biosynthesis protein CbiG.
  
 0.999
AGZ34017.1
COG1797 Cobyrinic acid a,c-diamide synthase.
 
 0.994
AGZ33420.1
COG2243 Precorrin-2 methylase.
  
 0.991
AGZ33415.1
COG2099 Precorrin-6x reductase.
 
  
 0.982
AGZ35512.1
COG2875 Precorrin-4 methylase.
 
  
 0.977
AGZ33418.1
precorrin-3B synthase; COG0155 Sulfite reductase, beta subunit (hemoprotein).
  
 0.976
AGZ34021.1
COG1492 Cobyric acid synthase.
  
 0.976
cbiD
cobalt-precorrin-6A synthase; COG1903 Cobalamin biosynthesis protein CbiD.
 
  
 0.973
AGZ35830.1
Precorrin 6A synthase; COG2243 Precorrin-2 methylase.
 
  
 0.942
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.