STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33449.1COG1960 Acyl-CoA dehydrogenases. (550 aa)    
Predicted Functional Partners:
fadB
Multifunctional fatty acid oxidation complex subunit alpha; COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.816
AGZ35906.1
COG0852 NADH:ubiquinone oxidoreductase 27 kD subunit.
   
 0.785
AGZ35551.1
long-chain-fatty-acid-CoA ligase; COG1022 Long-chain acyl-CoA synthetases (AMP-forming).
  
 0.643
AGZ35978.1
COG3173 Predicted aminoglycoside phosphotransferase.
 
 
 0.642
AGZ33448.1
COG0642 Signal transduction histidine kinase.
  
   0.598
AGZ34176.1
COG1024 Enoyl-CoA hydratase/carnithine racemase.
 
 0.591
AGZ34811.1
COG1960 Acyl-CoA dehydrogenases.
  
     0.581
AGZ36055.1
COG2025 Electron transfer flavoprotein, alpha subunit.
  
 
 0.574
AGZ36056.1
COG2086 Electron transfer flavoprotein, beta subunit.
  
 
 0.574
AGZ37524.1
COG2025 Electron transfer flavoprotein, alpha subunit.
  
 
 0.574
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.