STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33452.1Hypothetical protein. (67 aa)    
Predicted Functional Partners:
AGZ33453.1
COG1522 Transcriptional regulators.
       0.772
AGZ36099.1
COG3198 Uncharacterized protein conserved in bacteria.
  
     0.696
AGZ37809.1
Putative signal transduction protein.
  
     0.592
AGZ37152.1
COG3235 Predicted membrane protein.
  
     0.574
AGZ32951.1
Hypothetical protein.
  
     0.508
AGZ33456.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
     0.468
AGZ36017.1
Hypothetical protein.
  
     0.465
AGZ35534.1
Na+/H+ antiporter NhaC; COG2056 Predicted permease.
  
   
 0.456
AGZ36330.1
yecA family protein; COG3318 Predicted metal-binding protein related to the C-terminal domain of SecA.
  
     0.435
AGZ34383.1
Hypothetical protein.
  
     0.425
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.