STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33488.1GntR domain-containing protein; COG2186 Transcriptional regulators. (255 aa)    
Predicted Functional Partners:
AGZ33487.1
COG1620 L-lactate permease.
 
  
 0.742
AGZ35008.1
COG1802 Transcriptional regulators.
  
  
 0.699
lldD
COG1304 L-lactate dehydrogenase (FMN-dependent) and related alpha-hydroxy acid dehydrogenases.
 
  
 0.678
AGZ32992.1
COG1802 Transcriptional regulators.
  
  
 0.660
AGZ36133.1
COG1802 Transcriptional regulators.
  
  
 0.586
AGZ33485.1
COG0277 FAD/FMN-containing dehydrogenases.
 
  
 0.539
AGZ34917.1
COG1802 Transcriptional regulators.
  
  
 0.529
AGZ37290.1
COG1802 Transcriptional regulators.
  
  
 0.499
AGZ34039.1
COG2188 Transcriptional regulators.
  
    0.471
AGZ34431.1
COG1802 Transcriptional regulators.
  
  
 0.428
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.