STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33495.1COG0576 Molecular chaperone GrpE (heat shock protein). (184 aa)    
Predicted Functional Partners:
dnaK
COG0443 Molecular chaperone.
 
 0.998
AGZ33497.1
COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
 
 
 0.998
groES
COG0234 Co-chaperonin GroES (HSP10).
 
 
 0.985
hscA
Chaperone protein HscA; COG0443 Molecular chaperone.
 
 0.973
AGZ33245.1
COG5405 ATP-dependent protease HslVU (ClpYQ), peptidase subunit.
  
  
 0.964
hslU
COG1220 ATP-dependent protease HslVU (ClpYQ), ATPase subunit.
  
  
 0.961
AGZ33401.1
Molecular chaperone-like protein; COG0443 Molecular chaperone.
  
 0.956
groEL1
COG0459 Chaperonin GroEL (HSP60 family).
 
 0.954
groEL2
COG0459 Chaperonin GroEL (HSP60 family).
 
 0.949
AGZ37310.1
COG3118 Thioredoxin domain-containing protein.
 
  
 0.925
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.