STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
dnaKCOG0443 Molecular chaperone. (640 aa)    
Predicted Functional Partners:
AGZ33497.1
COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
 0.999
AGZ33495.1
COG0576 Molecular chaperone GrpE (heat shock protein).
 
 0.998
AGZ36032.1
Heat shock protein 90; COG0326 Molecular chaperone, HSP90 family.
  
 0.975
groEL1
COG0459 Chaperonin GroEL (HSP60 family).
 
 0.965
groEL2
COG0459 Chaperonin GroEL (HSP60 family).
 
 0.964
groES
COG0234 Co-chaperonin GroES (HSP10).
 
 
 0.947
hscB
Co-chaperone HscB; COG1076 DnaJ-domain-containing proteins 1.
  
 0.943
gyrB
DNA gyrase subunit B; COG0187 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit.
  
 
 0.917
AGZ35775.1
ATP-dependent Clp protease ATP-binding subunit ClpA; COG0542 ATPases with chaperone activity, ATP-binding subunit.
 
 
 0.911
AGZ36925.1
Scaffold protein; COG0822 NifU homolog involved in Fe-S cluster formation.
 
 0.886
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
Server load: low (26%) [HD]