Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33505.1ATP-dependent metalloprotease FtsH; COG0465 ATP-dependent Zn proteases. (634 aa)    
Predicted Functional Partners:
AGZ33356.1
HflK protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
 0.936
AGZ33506.1
COG0294 Dihydropteroate synthase and related enzymes.
  
  
 0.913
AGZ33357.1
HflC protein; COG0330 Membrane protease subunits, stomatin/prohibitin homologs.
  
 0.911
rrmJ
COG0293 23S rRNA methylase.
 
 
 0.897
glmM
COG1109 Phosphomannomutase.
  
  
 0.882
tpiA
COG0149 Triosephosphate isomerase.
 
 
 
 0.861
secG
COG1314 Preprotein translocase subunit SecG.
  
  
 0.719
rpsE
COG0098 Ribosomal protein S5.
  
 
 0.710
AGZ37342.1
COG0100 Ribosomal protein S11.
  
 
 0.705
rplS
COG0335 Ribosomal protein L19.
 
 
 0.700
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.