STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33537.1ABC transporter permease; COG0609 ABC-type Fe3+-siderophore transport system, permease component. (345 aa)    
Predicted Functional Partners:
AGZ33536.1
Periplasmic binding protein; COG4558 ABC-type hemin transport system, periplasmic component.
 
 
 0.991
hmuV
Hemin importer ATP-binding subunit; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 
 0.991
AGZ34951.1
ABC transporter-like protein; COG1120 ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components.
 
 0.985
AGZ37296.1
Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.965
AGZ34953.1
Periplasmic binding protein; COG0614 ABC-type Fe3+-hydroxamate transport system, periplasmic component.
 
 0.924
AGZ33539.1
Hypothetical protein; COG3016 Uncharacterized iron-regulated protein.
  
  
 0.790
AGZ33370.1
Binding-protein-dependent transport system inner membrane protein; COG1178 ABC-type Fe3+ transport system, permease component.
   
 
 0.566
AGZ37712.1
Binding-protein-dependent transport system inner membrane protein; COG1178 ABC-type Fe3+ transport system, permease component.
   
 
 0.566
AGZ33535.1
Rieske (2Fe-2S) domain-containing protein; COG2146 Ferredoxin subunits of nitrite reductase and ring-hydroxylating dioxygenases.
       0.559
AGZ33086.1
COG1178 ABC-type Fe3+ transport system, permease component.
   
 
 0.542
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.