STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33572.1COG2249 Putative NADPH-quinone reductase (modulator of drug activity B). (196 aa)    
Predicted Functional Partners:
AGZ33012.1
Potassium efflux system protein; COG0475 Kef-type K+ transport systems, membrane components.
  
 0.867
AGZ33571.1
Antibiotic biosynthesis monooxygenase.
     
 0.549
AGZ33573.1
COG0583 Transcriptional regulator.
       0.534
AGZ37883.1
Sodium/hydrogen exchanger; COG0475 Kef-type K+ transport systems, membrane components.
  
 0.512
AGZ33533.1
Hypothetical protein; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.489
AGZ34198.1
Aminotransferase AlaT; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.489
AGZ35088.1
Class I/II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.489
AGZ36909.1
COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.489
AGZ32918.1
Hypothetical protein.
  
     0.465
AGZ36155.1
Ion transport protein; COG1226 Kef-type K+ transport systems, predicted NAD-binding component.
   
 0.455
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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