STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33696.1Hypothetical protein; COG0792 Predicted endonuclease distantly related to archaeal Holliday junction resolvase. (123 aa)    
Predicted Functional Partners:
AGZ33697.1
LppC family lipoprotein; COG3107 Putative lipoprotein.
  
  
 0.894
AGZ33695.1
COG0279 Phosphoheptose isomerase.
  
    0.813
AGZ33020.1
Mg chelatase subunit ChlI; COG0606 Predicted ATPase with chaperone activity.
 
  
 0.807
AGZ37466.1
Competence protein ComF; COG1040 Predicted amidophosphoribosyltransferases.
 
    0.773
AGZ33698.1
uroporphyrin-III C/tetrapyrrole methyltransferase; COG0313 Predicted methyltransferases.
 
     0.764
AGZ33694.1
COG2823 Predicted periplasmic or secreted lipoprotein.
       0.752
AGZ32899.1
DNA protecting protein DprA; COG0758 Predicted Rossmann fold nucleotide-binding protein involved in DNA uptake.
 
  
 0.708
AGZ33958.1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2202 FOG: PAS/PAC domain.
   
    0.403
AGZ34101.1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2202 FOG: PAS/PAC domain.
   
    0.403
AGZ34983.1
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase; COG2199 FOG: GGDEF domain.
   
    0.403
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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