STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AGZ33700.1Cell division protein MraZ; COG2001 Uncharacterized protein conserved in bacteria. (151 aa)    
Predicted Functional Partners:
AGZ33701.1
16S rRNA m(4)C1402 methyltransferase; COG0275 Predicted S-adenosylmethionine-dependent methyltransferase involved in cell envelope biogenesis.
  
 0.996
AGZ33703.1
Peptidoglycan glycosyltransferase; COG0768 Cell division protein FtsI/penicillin-binding protein 2.
 
  
 0.951
AGZ33702.1
COG3116 Cell division protein.
  
  
 0.944
AGZ33708.1
COG0772 Bacterial cell division membrane protein.
 
  
 0.933
AGZ33713.1
COG0849 Actin-like ATPase involved in cell division.
 
  
 0.932
AGZ33705.1
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase; COG0770 UDP-N-acetylmuramyl pentapeptide synthase.
 
 
 
 0.925
AGZ33712.1
COG1589 Cell division septal protein.
 
   
 0.919
murC
COG0773 UDP-N-acetylmuramate-alanine ligase.
 
   
 0.917
murD
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; COG0771 UDP-N-acetylmuramoylalanine-D-glutamate ligase.
 
   
 0.915
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; COG0769 UDP-N-acetylmuramyl tripeptide synthase.
  
  
 0.907
Your Current Organism:
Pseudomonas sp. VLB120
NCBI taxonomy Id: 69328
Other names: P. sp. VLB120
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